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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899687.1_cds_XP_016449697.1_44218
CDS Infomation

[gene=LOC107774621] [db_xref=GeneID:107774621] [protein=4-hydroxyphenylpyruvate dioxygenase-like] [protein_id=XP_016449697.1] [location=join(95356..95959,96552..97104,99863..100049)] [gbkey=CDS]
Sequence

ATGGGCAAATTAGAAACTGTCACCACCACCTCTGCTGCCGCCGCCGATGACTCACAGGAG
CTGACCACCAATTTCAAGCTAGTGGGTTTCAAGAATTTCATTCGAACCAATCCCCGTTCC
GATTTTTTCTCCGTTAAACGTTTCCATCACATAGAATTTTGGTGCGGCGATGCTACCAAT
ACGGCTCGCCGTTTCTCTTGGTCTCTCGGGATGCCAATTGCAGCTAAATCCGACCTCTCC
ACCGGAAACTCCGTTCACGCTTCGTACCTCCTCCGTCCCGTTTCAGGTTCGCTTCAGTTC
CTCTTCACTGCTACTTATTCGCCGTCTATTTCGACGCCGTCATCTGCAGCCATCCCCAGT
TTCTCTACTTCCACACACCGCTCTTTTACGACAACTCACGGGCTCGGCGTCCGTGCCGTT
GCTTTGGAAGTGGAGAATGCTTACACGGCGTTCTCCGCGAGTATTTCACGTGGGGCGAAA
CCCATGTTTGAACCTGTGACTATCGATGAACGAGTCGCGGTGGCTGAAGTTCACTTATAC
GGCGACGTCGTTTTGCGGTTTGTGAGCTATCTGAAAGATGCGGACAGCCTCGTTTTCCTC
CCAGGTTTCGAGGCCATGGAGGAAACAGCATCGTACAAAGAACTGGATTATGGGATTCGC
CGGCTGGACCATGCTGTTGGGAATGTGCCGGAGCTGGGTCCTGTAGTGGACTATATCAAG
CGCTTTACGGGGTTTCATGAATTCGCCGAGTTCACAGCTGAAGATGTTGGGACTGCTGAG
AGCGGGCTGAACTCTATGGTCCTGGCAAACAATGACGAAACAGTGCTGCTTCCGTTGAAT
GAGCCGGTTTATGGAACCAAAAGGAAGAGTCAAATTCAAACGTATTTAGAGCACAATGAA
GGGGCAGGAGTGCAACATTTAGCTTTGGTTACAGAGGATATATTTAAAACATTGACTGAA
ATGAGGAAAAGGAGTGGGGTTGGGGGTTTTGAATTCATGCCTTCACCTCCGCCTACTTAT
TATAAGAATTTGAAGAATAGGGCAGGGGATGTACTGACTGATGAACAGATTCAGGCGTGC
GAAGAATTGGGAATATTGGTGGATAGGGATGACCAGGGGACCCTTTTACAGATCTTCACC
AAGCCTGTGGGGGACAGACCAACTATATTTATAGAAATAATTCAGAGAATCGGTTGCATG
CTCAAAGACGAAAAAGGACAGGTGTATCAGAAGGGCGGCTGTGGAGGCTTCGGAAAGGGA
AACTTTTCAGAGCTCTTTAGATCCATAGAGGAATATGAGAAGACGCTTGAAGCCAAACAA
GCTAATCAAGTTGCTGCTGCTTGA

Peptide Sequence

PEP ID

XP_016449697.1
PEP Infomation

PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Nicotiana tabacum]
Sequence

MGKLETVTTTSAAAADDSQELTTNFKLVGFKNFIRTNPRSDFFSVKRFHHIEFWCGDATN
TARRFSWSLGMPIAAKSDLSTGNSVHASYLLRPVSGSLQFLFTATYSPSISTPSSAAIPS
FSTSTHRSFTTTHGLGVRAVALEVENAYTAFSASISRGAKPMFEPVTIDERVAVAEVHLY
GDVVLRFVSYLKDADSLVFLPGFEAMEETASYKELDYGIRRLDHAVGNVPELGPVVDYIK
RFTGFHEFAEFTAEDVGTAESGLNSMVLANNDETVLLPLNEPVYGTKRKSQIQTYLEHNE
GAGVQHLALVTEDIFKTLTEMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIQAC
EELGILVDRDDQGTLLQIFTKPVGDRPTIFIEIIQRIGCMLKDEKGQVYQKGGCGGFGKG
NFSELFRSIEEYEKTLEAKQANQVAAA

Transcript Sequence

Gene sequence data has not been registered.